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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37576762_37577231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37576762 - 37577231

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

AAATATTTACCC

Flanking Amino Acid:

YYDCIRIHCQGEDTLLVPVH

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

1.1

0.4

13.8

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

49.8

-0

1.8

59.9

38.8

Associated Gene:

Gene:

CFAP221

Ensembl Gene ID:

ENSAPLG00000009264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009632

37572365 - 37594771

22407