Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37581042_37581259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37581042 - 37581259

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTAA

5'SS Class:

major

3'SS Sequence:

GATATTCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTTTCTGATAT

Flanking Amino Acid:

GKMKIRNLKKVLCQGDEEIK

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.2

71.9

36.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.1

0.61

0.9

69.9

Minor 5ss

41.6

-0.9

3.2

55.3

48.9

Minor BPS

52.4

0.15

1.8

73.63

43.1

Associated Gene:

Gene:

CFAP221

Ensembl Gene ID:

ENSAPLG00000009264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009632

37572365 - 37594771

22407