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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37587694_37588135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37587694 - 37588135

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGGGTTTTAAAT

Flanking Amino Acid:

YSSLELCRDLEPDALGLVPI

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.8

35.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.2

0.77

0.8

81.3

36.2

Minor 5ss

38.1

-1.3

3.1

47.2

43.7

Minor BPS

56.3

0.28

1.5

68.97

42.3

Associated Gene:

Gene:

CFAP221

Ensembl Gene ID:

ENSAPLG00000009264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009632

37572365 - 37594771

22407