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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37588217_37589191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37588217 - 37589191

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCGCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ATCTCCTGCAGT

Flanking Amino Acid:

RHVIPFYDLKVPQHFRIMGY

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

64.4

0.33

0.9

62.1

33.7

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

48.4

-0

2.2

70.92

45.8

Associated Gene:

Gene:

CFAP221

Ensembl Gene ID:

ENSAPLG00000009264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009632

37572365 - 37594771

22407