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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37591927_37592438_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
37591927 - 37592438

Intron Length:
512

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
ATTTCCATCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
ATTTCCATCACA

Flanking Amino Acid:
NTPTLASTISRDPYSLDMLP

Intron Amino Acid Position:
746

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.1
1.02
0.7
87.2
27

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
76.7
0.6
0.9
70.1
34.4

Minor 5ss
36.1
-1.6
3
50.2
45.8

Minor BPS
62.1
0.37
2
78.97
37.1

Associated Gene:

Gene:
CFAP221

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37572365 - 37594771
22407