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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37614804_37619589_F

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
37614804 - 37619589
Intron Length:
4786

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGG|GTGAGTGGG
5'SS Class:
major
3'SS Sequence:
TCTCCACCTCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ACTTTAT
U12 Branch Point Sequence:
TTTTTCTCCACC
Flanking Amino Acid:
GLAARHLPAWVHFPDVERVE
Intron Amino Acid Position:
98

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.3
0.69
1
63.1
43.4
Major BPS
75.1
0.62
1
65.6
41
Major PPT
76.3
0.59
0.8
66.6
34.5
Minor 5ss
26.2
-2.7
2.9
22.9
37.3
Minor BPS
60.9
0.32
2
78.1
37.8

Associated Gene:

Gene:
ESYT3
Ensembl Gene ID:
ENSAPLG00000009458
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000009875
37614513 - 37644346
29834