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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37620778_37626630_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
37620778 - 37626630

Intron Length:
5853

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAACATTC

5'SS Class:
major

3'SS Sequence:
AACTTTCTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTGCAA

U12 Branch Point Sequence:
CTATTGCAAACT

Flanking Amino Acid:
RRQIVLDLQICYAGDCEIHM

Intron Amino Acid Position:
182

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.5
1.2
68.6
37.4

Major BPS
57
0.18
1.3
69.4
37.7

Major PPT
80.8
0.69
0.8
77.6
35.8

Minor 5ss
48.2
-0.2
2.9
65.1
40.6

Minor BPS
42.2
-0.5
2.5
64.52
45.9

Associated Gene:

Gene:
ESYT3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37614513 - 37644346
29834