Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37634953_37635050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37634953 - 37635050

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACG

5'SS Class:

major

3'SS Sequence:

TTTTCTAATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTTTTCTAATT

Flanking Amino Acid:

VYLDSAFNLPKNHFEYSNGE

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.4

41.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.9

0.76

0.9

82.7

32.6

Minor 5ss

38.2

-1.3

2.7

49.6

40.1

Minor BPS

62.3

0.46

1.6

79.49

37.4

Associated Gene:

Gene:

ESYT3

Ensembl Gene ID:

ENSAPLG00000009458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009875

37614513 - 37644346

29834