Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37645885_37646734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37645885 - 37646734

Intron Length:

850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTAGG

5'SS Class:

major

3'SS Sequence:

TTACAAATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTTACA

Flanking Amino Acid:

QQLLGTQDIHSIINKLEEHE

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

67.2

43.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.1

0.5

67.6

42.1

Minor 5ss

41.3

-1

2.5

51.6

44.8

Minor BPS

63.1

0.41

1.9

80.26

34.9

Associated Gene:

Gene:

CEP70

Ensembl Gene ID:

ENSAPLG00000009891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010334

37645247 - 37656704

11458