Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37652477_37652869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37652477 - 37652869

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGGAAC

5'SS Class:

major

3'SS Sequence:

GTCTGTGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AATGAGTGAAAT

Flanking Amino Acid:

ATPNYRALLTSFQNQLLEAK

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

66.1

39.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.3

0.57

68.5

42.1

Minor 5ss

39.1

-1.2

3.1

51.8

45.2

Minor BPS

40.7

-0.6

2.3

59.11

43.2

Associated Gene:

Gene:

CEP70

Ensembl Gene ID:

ENSAPLG00000009891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010334

37645247 - 37656704

11458