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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37656217_37656695_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37656217 - 37656695

Intron Length:
479

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACCGGGG

5'SS Class:
major

3'SS Sequence:
CTCCCAACTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTCAT

U12 Branch Point Sequence:
CTTCTCCCAACT

Flanking Amino Acid:
MAEQEKAEWENLN

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.7
0.32
1.3
49.8
46.9

Major BPS
69.4
0.48
1.2
71.6
36.4

Major PPT
66
0.36
0.8
59.4
30

Minor 5ss
33.1
-1.9
3.7
46.9
48.5

Minor BPS
50.6
0.1
1.9
74.26
42.3

Associated Gene:

Gene:
CEP70

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37645247 - 37656704
11458