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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37665025_37666245_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37665025 - 37666245

Intron Length:
1221

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACATAA

5'SS Class:
major

3'SS Sequence:
TTTTCTTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTCTCAAAA

Flanking Amino Acid:
GFHRMYSPPTDQRYGAGIYF

Intron Amino Acid Position:
724

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.6
0.67
1.1
73.9
32.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
95
1.01
0.6
88.4
28.7

Minor 5ss
42.8
-0.8
2.9
56
48.2

Minor BPS
68.8
0.58
1.6
80.83
34.3

Associated Gene:

Gene:
PARP9

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37664735 - 37675436
10702