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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37666421_37667528_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
37666421 - 37667528
Intron Length:
1108

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAAGAGG
5'SS Class:
major
3'SS Sequence:
ACTTATGTTACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
GACTTAT
U12 Branch Point Sequence:
TTACGCTAGACT
Flanking Amino Acid:
FEKAGLHVHKIEKIRNPLLS
Intron Amino Acid Position:
666

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.1
0.69
1
66.7
44.4
Major BPS
65.9
0.39
1.2
57.6
41.3
Major PPT
76
0.59
1
68.6
41.3
Minor 5ss
31
-2.2
3.2
39.7
45.9
Minor BPS
49.2
0.02
2.1
73.46
43.4

Associated Gene:

Gene:
PARP9
Ensembl Gene ID:
ENSAPLG00000010291
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010725
37664735 - 37675436
10702