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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37675935_37676060_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37675935 - 37676060

Intron Length:
126

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGGGTG

5'SS Class:
major

3'SS Sequence:
CCTCTGCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTTCAT

U12 Branch Point Sequence:
ATGGCCCAAATG

Flanking Amino Acid:
TFLVYFHQERDKKNVESRTD

Intron Amino Acid Position:
58

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
68.1
40.5

Major BPS
67
0.42
1.4
71.4
45.1

Major PPT
71.4
0.48
0.8
64.9
30.7

Minor 5ss
31.4
-2.1
3.9
45.4
49.7

Minor BPS
44.3
-0.5
2.1
49.88
44.6

Associated Gene:

Gene:
DTX3L

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37675763 - 37682754
6992