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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37688136_37689683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37688136 - 37689683

Intron Length:

1548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CGGGTTTGATCT

Flanking Amino Acid:

AAVVAFTGSTDTEEIVKKLN

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

88.1

0.86

0.7

80.4

31.6

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

42.8

-0.4

1.7

52.15

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044408

37685221 - 37702772

17552

ENSAPLT00000010864

37685221 - 37702772

17552