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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37698978_37699076_F


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37698978 - 37699076

Intron Length:
99

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTAAGTAGA

5'SS Class:
strong_major

3'SS Sequence:
TATTTCATTGTAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTCAT

U12 Branch Point Sequence:
GTGTATTTCATT

Flanking Amino Acid:
KSKSFLSRLTSLLSSEKESP

Intron Amino Acid Position:
1441

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.3
0.81
1
80.1
34.8

Major BPS
91.2
1.02
0.7
91.7
20.2

Major PPT
80
0.68
0.8
75.1
34.1

Minor 5ss
37.5
-1.4
2.8
47
41.7

Minor BPS
49.4
0.03
1.9
69.09
42.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37685221 - 37702772
17552

37685221 - 37702772
17552