About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37706075_37706188_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37706075 - 37706188

Intron Length:
114

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGCGTGCC

5'SS Class:
strong_major

3'SS Sequence:
GTGCTGCCCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAT

U12 Branch Point Sequence:
TTAGCCCCAACC

Flanking Amino Acid:
PDKYDYGRAKVPGPLTLEME

Intron Amino Acid Position:
693

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
69.5
35.4

Major BPS
78.8
0.71
1
67.6
40.6

Major PPT
66.4
0.37
1
62.1
39.9

Minor 5ss
27.4
-2.6
3.2
35.6
41.2

Minor BPS
51.3
0.02
2
68.64
42.4

Associated Gene:

Gene:
ANKZF1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37704849 - 37710587
5739

37705090 - 37710587
5498