Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37709385_37709741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37709385 - 37709741

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CCTATCTCATCT

Flanking Amino Acid:

MEVFEEKTSAGDISSISGSD

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

83.8

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

80.5

0.69

0.8

74.3

30.2

Minor 5ss

28.5

-2.5

3.1

38.7

46.6

Minor BPS

47.7

-0.1

1.9

64.12

46.2

Associated Gene:

Gene:

ANKZF1

Ensembl Gene ID:

ENSAPLG00000010753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017984

37704849 - 37710587

5739

ENSAPLT00000011228

37705090 - 37710587

5498