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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37715326_37715533_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37715326 - 37715533

Intron Length:
208

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGCCTGGG

5'SS Class:
major

3'SS Sequence:
TTTGACTCTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTGAC

U12 Branch Point Sequence:
TCTGTTTTGACT

Flanking Amino Acid:
SIQSLQSESEPHSLIANVIA

Intron Amino Acid Position:
616

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.7
0.37
1.2
54.2
45

Major BPS
86.5
0.91
0.8
77.4
37.4

Major PPT
80.5
0.69
0.9
74
36.3

Minor 5ss
31.1
-2.2
3.3
40.6
45.6

Minor BPS
65
0.55
1.4
77.64
39.7

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37710586 - 37716784
6199