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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37721251_37721337_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
37721251 - 37721337

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGAGCC

5'SS Class:
major

3'SS Sequence:
CCCCCCCCTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCTGAT

U12 Branch Point Sequence:
CTCGCCTGATGT

Flanking Amino Acid:
RGTSSINSLLSYIVFSIVPT

Intron Amino Acid Position:
377

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.2
0.59
1.3
68.7
37.5

Major BPS
61
0.27
1.3
53.3
44.2

Major PPT
72.2
0.5
0.7
64.9
23.7

Minor 5ss
27.1
-2.6
3.1
34.4
41.3

Minor BPS
44.2
-0.3
2.1
59.91
49.3

Associated Gene:

Gene:
ABCB6

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37719586 - 37725721
6136