Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37722656_37722811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37722656 - 37722811

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGCA

5'SS Class:

major

3'SS Sequence:

CCTTTGAGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

TGTCCCCCAAAT

Flanking Amino Acid:

SVMPGQTLALVGPSGSGKST

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

66.6

32.2

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

66.8

0.38

61.4

38.8

Minor 5ss

25.4

-2.8

3.1

27.5

37.4

Minor BPS

49.2

0.02

73.57

42.1

Associated Gene:

Gene:

ABCB6

Ensembl Gene ID:

ENSAPLG00000011094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011575

37719586 - 37725721

6136