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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37729028_37729081_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37729028 - 37729081

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCGCAGCTG

5'SS Class:

weak_major

3'SS Sequence:

AGCTTCACCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

CACAGCTTCACC

Flanking Amino Acid:

TEPEEKLSFQEEEEAEDFEL

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.5

0.06

1.2

48.9

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

47.7

-0.1

1.7

51.6

37.4

Minor 5ss

18.6

-3.6

4.1

28.2

37.9

Minor BPS

44.7

-0.4

2.2

51.62

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041033

37728824 - 37739697

10874