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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3787282_3788082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3787282 - 3788082

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCC

5'SS Class:

major

3'SS Sequence:

ATTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TAGTTTTTAACA

Flanking Amino Acid:

MAARLLRPLPRLKPFNRLQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

68.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

90.7

0.92

0.7

27.2

Minor 5ss

-1.6

3.6

50.9

45.8

Minor BPS

74.5

0.76

1.1

75.73

35.7

Associated Gene:

Gene:

HIBCH

Ensembl Gene ID:

ENSAPLG00000012247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012759

3787250 - 3826802

39553

ENSAPLT00000036301

3787250 - 3826578

39329