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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38080911_38083806_R

Intron Information:

Intron Rank:

149513

Intron Class:

major

Intron Phase:

Intron Coordinates:

38080911 - 38083806

Intron Length:

2896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCCT

5'SS Class:

major

3'SS Sequence:

TTTCTTTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TTTCTTTTACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

66.5

44.9

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

86.5

0.82

0.8

81.6

34.7

Minor 5ss

41.3

-1

3.1

60.4

43.9

Minor BPS

0.44

1.6

75.92

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035722

38080594 - 38085208

4615