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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38143656_38143761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38143656 - 38143761

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

ATGTCCTGCATC

Flanking Amino Acid:

SCIAALAMVTERHGLKEPKR

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

88.8

0.87

0.7

84.5

30.4

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

52.1

0.05

1.9

65.48

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020461

38142869 - 38144902

2034