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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3814615_3815523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3814615 - 3815523

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGTG

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

AAGCAGTTAATG

Flanking Amino Acid:

VLDEHMEKINSLFSANSMEE

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

70.7

39.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

89.4

0.89

0.6

88.9

20.3

Minor 5ss

42.5

-0.8

3.1

57.9

46.8

Minor BPS

43.4

-0.6

2.1

45.49

40.8

Associated Gene:

Gene:

HIBCH

Ensembl Gene ID:

ENSAPLG00000012247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038715

3787219 - 3826475

39257

ENSAPLT00000036301

3787250 - 3826578

39329

ENSAPLT00000012759

3787250 - 3826802

39553