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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3820275_3821435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3820275 - 3821435

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTATTTGTAATA

Flanking Amino Acid:

MEYRLSQACMRGHDFYEGVR

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

87.2

0.84

0.7

84.6

30.3

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

56.6

0.2

71.01

35.8

Associated Gene:

Gene:

HIBCH

Ensembl Gene ID:

ENSAPLG00000012247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038715

3787219 - 3826475

39257

ENSAPLT00000036301

3787250 - 3826578

39329

ENSAPLT00000012759

3787250 - 3826802

39553