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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38204827_38209453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38204827 - 38209453

Intron Length:

4627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGATA

5'SS Class:

major

3'SS Sequence:

TTCTTTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CCTTCTTTATTT

Flanking Amino Acid:

GVHIVMPGYYSPDNMGLLDP

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

78.7

37.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

90.2

0.9

0.7

89.1

26.1

Minor 5ss

41.4

-1

3.2

57.2

47.1

Minor BPS

0.49

1.6

74.81

43.2

Associated Gene:

Gene:

GPD2

Ensembl Gene ID:

ENSAPLG00000010646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030799

38181371 - 38219307

37937

ENSAPLT00000011123

38165344 - 38219307

53964

ENSAPLT00000042166

38165344 - 38219307

53964

ENSAPLT00000041219

38166365 - 38219307

52943