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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38213353_38213621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38213353 - 38213621

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTACTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CTTGTCTTACTA

Flanking Amino Acid:

VSEFPYIEAEVIYGVKEYAR

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

74.4

41.9

Major BPS

79.7

0.74

79.6

35.6

Major PPT

75.9

0.58

0.9

74.4

35.1

Minor 5ss

41.2

-1

2.5

51.1

45.4

Minor BPS

55.3

0.16

1.7

65.77

41.9

Associated Gene:

Gene:

GPD2

Ensembl Gene ID:

ENSAPLG00000010646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030799

38181371 - 38219307

37937

ENSAPLT00000011123

38165344 - 38219307

53964

ENSAPLT00000042166

38165344 - 38219307

53964

ENSAPLT00000041219

38166365 - 38219307

52943