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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38215778_38219144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38215778 - 38219144

Intron Length:

3367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

GATAAGTTAACG

Flanking Amino Acid:

GQVELIEFLQLMSAIQKGHV

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

90.3

0.91

0.7

88.9

28.1

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

46.8

-0.3

2.3

55.59

44.7

Associated Gene:

Gene:

GPD2

Ensembl Gene ID:

ENSAPLG00000010646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011123

38165344 - 38219307

53964

ENSAPLT00000042166

38165344 - 38219307

53964

ENSAPLT00000030799

38181371 - 38219307

37937