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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38349968_38350807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38349968 - 38350807

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGAA

5'SS Class:

major

3'SS Sequence:

TCCTTCTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TCCTTCTCCACA

Flanking Amino Acid:

IILVDDFSTKEYLKEKLDAY

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.5

38.7

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

80.7

0.69

0.7

75.6

26.6

Minor 5ss

34.3

-1.8

3.6

45.7

49.5

Minor BPS

49.2

-0

62.43

44.3

Associated Gene:

Gene:

GALNT5

Ensembl Gene ID:

ENSAPLG00000010565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043060

38344894 - 38355719

10826

ENSAPLT00000010988

38344894 - 38357469

12576