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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38350928_38351327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38350928 - 38351327

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

AGAGCCTGATGG

Flanking Amino Acid:

ARLAGAQVAKGDVLTFLDSH

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

0.27

1.3

53.3

44.2

Major PPT

75.3

0.57

0.8

69.2

31.4

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

40.4

-0.8

40.32

43.2

Associated Gene:

Gene:

GALNT5

Ensembl Gene ID:

ENSAPLG00000010565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043060

38344894 - 38355719

10826

ENSAPLT00000010988

38344894 - 38357469

12576