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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38351959_38352411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38351959 - 38352411

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

CGTCTGTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

ACCGACTGACGT

Flanking Amino Acid:

KNKIKETDIIRCPVMAGGLF

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

73.5

0.53

0.9

64.4

41.4

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

37.6

-0.8

47.35

Associated Gene:

Gene:

GALNT5

Ensembl Gene ID:

ENSAPLG00000010565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043060

38344894 - 38355719

10826

ENSAPLT00000010988

38344894 - 38357469

12576