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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38352530_38353079_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38352530 - 38353079

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TTTCTCTCAAAG

Flanking Amino Acid:

GGENMEISFKVWMCGGEIEI

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

73.4

38.9

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

75.6

0.58

0.8

72.7

32.1

Minor 5ss

39.5

-1.2

53.1

44.1

Minor BPS

56.9

0.08

1.7

66.47

40.8

Associated Gene:

Gene:

GALNT5

Ensembl Gene ID:

ENSAPLG00000010565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043060

38344894 - 38355719

10826

ENSAPLT00000010988

38344894 - 38357469

12576