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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38353404_38354814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38353404 - 38354814

Intron Length:

1411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTACC

5'SS Class:

major

3'SS Sequence:

GGTTATTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTGTCTAAATT

Flanking Amino Acid:

EAPLVKASGLLVNIATARCI

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

71.7

38.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

74.8

0.56

0.9

66.1

Minor 5ss

36.1

-1.6

2.9

43.4

37.9

Minor BPS

58.4

0.34

1.8

75.64

41.8

Associated Gene:

Gene:

GALNT5

Ensembl Gene ID:

ENSAPLG00000010565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043060

38344894 - 38355719

10826

ENSAPLT00000010988

38344894 - 38357469

12576