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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38355552_38357328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38355552 - 38357328

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAA

U12 Branch Point Sequence:

AGCCCAAGGACC

Flanking Amino Acid:

SSLAAARPELAEHLVAEHLQ

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

45.7

-0.2

1.2

50.2

36.7

Major PPT

79.6

0.67

0.7

73.3

24.9

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

39.6

-0.8

1.8

45.86

35.5

Associated Gene:

Gene:

GALNT5

Ensembl Gene ID:

ENSAPLG00000010565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010988

38344894 - 38357469

12576