Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_38395878_38396212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38395878 - 38396212

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGATTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTTTTCCTAACT

Flanking Amino Acid:

NIPNQWQSCEALRVMGRIMR

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

68.5

0.42

1.1

68.4

41.5

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

72.7

0.79

1.6

89.41

34.5

Associated Gene:

Gene:

ACVR1C

Ensembl Gene ID:

ENSAPLG00000005547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005730

38395259 - 38424973

29715