Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_38468159_38504056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38468159 - 38504056

Intron Length:

35898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGTTGT

5'SS Class:

major

3'SS Sequence:

TCTCTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

CAGCTCTCAAGT

Flanking Amino Acid:

MGTLWCDGPAMIDGVMI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

69.9

43.4

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

83.3

0.75

0.7

76.5

32.1

Minor 5ss

40.4

-1.1

3.1

49.7

46.5

Minor BPS

46.3

-0.2

1.8

58.21

44.7

Associated Gene:

Gene:

ACVR1

Ensembl Gene ID:

ENSAPLG00000004767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004960

38439959 - 38504079

64121