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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38508252_38510007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38508252 - 38510007

Intron Length:

1756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CTCCTCTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CTCCTCTCAACA

Flanking Amino Acid:

YRTGPVLSISHGMGIPSISI

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.3

69.7

41.3

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

73.6

0.53

0.8

69.1

Minor 5ss

37.9

-1.4

2.6

42.8

36.9

Minor BPS

56.8

0.21

1.6

64.43

42.1

Associated Gene:

Gene:

UPP2

Ensembl Gene ID:

ENSAPLG00000004498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004635

38506443 - 38513042

6600