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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38515230_38517083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38515230 - 38517083

Intron Length:

1854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTGTTTTAACA

Flanking Amino Acid:

FKLHTFSEEQIISDPRIRVE

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

81.6

30.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.2

0.77

0.9

35.4

Minor 5ss

37.3

-1.4

3.3

52.6

44.6

Minor BPS

75.7

0.8

1.2

82.25

33.1

Associated Gene:

Gene:

CCDC148

Ensembl Gene ID:

ENSAPLG00000004224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004343

38515083 - 38559327

44245