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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38546357_38552972_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38546357 - 38552972

Intron Length:

6616

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATA|GCTGGTTCT

5'SS Class:

weak_major

3'SS Sequence:

TGGAAAGAAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

GAACACTGAATG

Flanking Amino Acid:

YRSCSYPYHDNQWVFQTVIN

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.05

1.4

57.5

41.3

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

43.6

-0.3

1.2

32.2

39.3

Minor 5ss

29.3

-2.4

44.2

38.3

Minor BPS

46.3

-0.4

1.6

46.53

39.2

Associated Gene:

Gene:

CCDC148

Ensembl Gene ID:

ENSAPLG00000004224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004343

38515083 - 38559327

44245