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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3858818_3860928_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3858818 - 3860928

Intron Length:
2111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTAAGTAAC

5'SS Class:
major

3'SS Sequence:
CATTCATTTATAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTCAT

U12 Branch Point Sequence:
TGTTCAGTAATC

Flanking Amino Acid:
TETIITMPTESDFLVQMEGK

Intron Amino Acid Position:
125

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1.1
74.4
36.1

Major BPS
79.8
0.74
0.9
81.3
29.9

Major PPT
75.8
0.58
0.8
69.5
35.5

Minor 5ss
38
-1.4
2.8
46.6
41.8

Minor BPS
53.8
0.1
2.2
72.34
38.8

Associated Gene:

Gene:
MSTN

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3858445 - 3863889
5445