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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38626522_38626679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38626522 - 38626679

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCTGTTGT

5'SS Class:

major

3'SS Sequence:

TTCATATCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATTCTTACGT

Flanking Amino Acid:

PEQTSLHESEGSVGNSRSST

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

62.3

44.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.7

0.67

0.9

73.2

36.2

Minor 5ss

-0.8

2.6

50.1

46.2

Minor BPS

60.3

0.4

1.9

42.2

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045090

38575749 - 38664101

88353

ENSAPLT00000003459

38588964 - 38664101

75138