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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38626871_38627596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38626871 - 38627596

Intron Length:

726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACTTG

5'SS Class:

major

3'SS Sequence:

TGTTTTTCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TGTTTTTCAACA

Flanking Amino Acid:

SRAEGQTSVQPSANIATNRA

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

63.2

43.9

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

81.1

0.7

0.9

77.7

35.5

Minor 5ss

45.7

-0.4

3.2

64.2

47.3

Minor BPS

0.53

1.5

75.9

35.2

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003459

38588964 - 38664101

75138

ENSAPLT00000032945

38575749 - 38664101

88353

ENSAPLT00000030373

38575749 - 38664101

88353

ENSAPLT00000028929

38596286 - 38664101

67816

ENSAPLT00000022562

38575749 - 38664101

88353

ENSAPLT00000045090

38575749 - 38664101

88353