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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38628156_38631995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38628156 - 38631995

Intron Length:

3840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTTATACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATA

Flanking Amino Acid:

MVPPRPDSLTGVGNLQRSSS

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.4

0.39

60.7

44.4

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

71.7

0.68

1.3

33.3

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028929

38596286 - 38664101

67816