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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38632213_38635031_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38632213 - 38635031

Intron Length:

2819

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCACCTAATGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTCCCTTGAATA

Flanking Amino Acid:

PSIDSIQKDPREFAWRDPEL

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.8

1.13

0.7

81.1

32.3

Major BPS

73.5

0.59

81.3

29.9

Major PPT

57.2

0.16

1.1

57.5

36.4

Minor 5ss

24.2

-3

3.6

33.3

41.7

Minor BPS

61.8

0.37

1.4

69.43

37.2

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028929

38596286 - 38664101

67816

ENSAPLT00000022562

38575749 - 38664101

88353

ENSAPLT00000045090

38575749 - 38664101

88353

ENSAPLT00000003459

38588964 - 38664101

75138

ENSAPLT00000032945

38575749 - 38664101

88353

ENSAPLT00000030373

38575749 - 38664101

88353