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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38635165_38639221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38635165 - 38639221

Intron Length:

4057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTAC

5'SS Class:

major

3'SS Sequence:

TTCCATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATCGTTCCATT

Flanking Amino Acid:

CFGDNKVKTEVCRLGGIKHL

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

38.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

86.2

0.81

0.7

84.1

30.5

Minor 5ss

-1.6

3.4

49.9

46.7

Minor BPS

39.3

-0.7

2.1

54.09

42.2

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030373

38575749 - 38664101

88353

ENSAPLT00000028929

38596286 - 38664101

67816

ENSAPLT00000022562

38575749 - 38664101

88353

ENSAPLT00000045090

38575749 - 38664101

88353

ENSAPLT00000003459

38588964 - 38664101

75138

ENSAPLT00000032945

38575749 - 38664101

88353