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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38653518_38654411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38653518 - 38654411

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGAA

5'SS Class:

major

3'SS Sequence:

AGTTCGATTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGATAT

U12 Branch Point Sequence:

TTCTACTAGATA

Flanking Amino Acid:

LQNLSAGNWKFAAYIRAAVR

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

70.3

35.9

Major BPS

56.3

0.16

1.2

42.8

Major PPT

0.47

62.3

42.7

Minor 5ss

43.6

-0.7

57.6

47.1

Minor BPS

51.4

0.04

1.9

66.8

40.1

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030373

38575749 - 38664101

88353

ENSAPLT00000028929

38596286 - 38664101

67816

ENSAPLT00000022562

38575749 - 38664101

88353

ENSAPLT00000045090

38575749 - 38664101

88353

ENSAPLT00000003459

38588964 - 38664101

75138

ENSAPLT00000032945

38575749 - 38664101

88353