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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38659114_38661217_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38659114 - 38661217

Intron Length:

2104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TAAATCCTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

NQQMSPVIQSGSACFSVPEY

Intron Amino Acid Position:

1074

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

74.1

38.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

60.8

0.24

Minor 5ss

28.9

-2.4

2.6

32.6

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032945

38575749 - 38664101

88353

ENSAPLT00000030373

38575749 - 38664101

88353

ENSAPLT00000003459

38588964 - 38664101

75138