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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38659114_38662265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38659114 - 38662265

Intron Length:

3152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTCATCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TAATCTTTATTT

Flanking Amino Acid:

NQQMSPVIQSVGSTSSSPAL

Intron Amino Acid Position:

1096

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

74.1

38.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

82.8

0.74

0.9

82.9

32.8

Minor 5ss

28.9

-2.4

2.6

32.6

Minor BPS

65.4

0.56

1.5

77.84

38.8

Associated Gene:

Gene:

PKP4

Ensembl Gene ID:

ENSAPLG00000003306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028929

38596286 - 38664101

67816

ENSAPLT00000022562

38575749 - 38664101

88353